Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Thioclava
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Thioclava |
| Species | Thioclava sp. F28-4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839803 bp
Thymine Count
828712 bp
Guanine Count
1439428 bp
Cytosine Count
1472225 bp
Genome Length
4580168 bp
Protein-coding Genes
4252 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | BMI87_10305 | Not Available | Negative | 2220704 - 2221453 | 26379.1 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | BMI87_10310 | Not Available | Negative | 2221596 - 2222396 | 28111.8 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | BMI87_10315 | Not Available | Negative | 2222390 - 2223259 | 31842.8 |
| aspartate aminotransferase family protein | BMI87_10320 | Not Available | Negative | 2223268 - 2224680 | 51508.5 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | BMI87_10325 | Not Available | Negative | 2224719 - 2225699 | 37521.4 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | BMI87_10330 | Not Available | Negative | 2225754 - 2227262 | 54028.4 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | BMI87_10335 | Not Available | Negative | 2227262 - 2227660 | 13880.7 |
| homoprotocatechuate degradation operon regulator, hpar | BMI87_10340 | Not Available | Positive | 2227765 - 2228247 | 18132.8 |
| hypothetical protein | BMI87_10345 | Not Available | Positive | 2228309 - 2228767 | 17315.7 |
| c4-dicarboxylate abc transporter permease | BMI87_10350 | Not Available | Negative | 2228784 - 2230097 | 45690.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
