Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium actinidiae |
| Strain | strain ICMP 19972 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1194415 bp
Thymine Count
1171781 bp
Guanine Count
1240134 bp
Cytosine Count
1276017 bp
Genome Length
4886946 bp
Protein-coding Genes
4080 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-heptose--lps heptosyltransferase | BSK71_19340 | Not Available | Positive | 4454365 - 4455468 | 40471.7 |
| lipopolysaccharide heptosyltransferase 1 | BSK71_19345 | Not Available | Positive | 4455465 - 4456448 | 36909.5 |
| ligase | BSK71_19350 | Not Available | Positive | 4456445 - 4457728 | 47386.9 |
| lipopolysaccharide core heptosyltransferase rfaq | BSK71_19355 | Not Available | Positive | 4457984 - 4458991 | 38085.0 |
| glucosyltransferase i rfag | BSK71_19360 | Not Available | Positive | 4458988 - 4460112 | 42482.5 |
| lipopolysaccharide 1,3-galactosyltransferase | BSK71_19365 | Not Available | Positive | 4460188 - 4461207 | 39332.9 |
| hypothetical protein | BSK71_19370 | Not Available | Positive | 4461257 - 4461560 | 12073.7 |
| atp-dependent chaperone clpb | BSK71_19380 | Not Available | Negative | 4462391 - 4464967 | 95693.0 |
| hypothetical protein | BSK71_19385 | Not Available | Negative | 4465101 - 4465826 | 25957.1 |
| 23s rrna pseudouridine(1911/1915/1917) synthase | BSK71_19390 | Not Available | Negative | 4465870 - 4466847 | 36712.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
