Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium actinidiae |
| Strain | strain ICMP 19972 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1194415 bp
Thymine Count
1171781 bp
Guanine Count
1240134 bp
Cytosine Count
1276017 bp
Genome Length
4886946 bp
Protein-coding Genes
4080 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspd | BSK71_06325 | Not Available | Negative | 1456249 - 1458171 | 69139.2 |
| type ii secretion system protein gspc | BSK71_06330 | Not Available | Negative | 1458290 - 1459153 | 31130.9 |
| exo-poly-alpha-d-galacturonosidase | BSK71_06335 | Not Available | Negative | 1459204 - 1461183 | 71764.0 |
| pectate lyase | BSK71_06340 | Not Available | Negative | 1461310 - 1462878 | 57127.5 |
| general secretion pathway protein | BSK71_06345 | Not Available | Positive | 1463407 - 1463976 | 20335.7 |
| pullulanase | BSK71_06350 | Not Available | Negative | 1463973 - 1464386 | 14525.2 |
| alanine transaminase | BSK71_06355 | Not Available | Negative | 1464508 - 1465749 | 45874.3 |
| dipeptide epimerase | BSK71_06360 | Not Available | Positive | 1466103 - 1467083 | 35732.9 |
| d-amino acid aminotransferase | BSK71_06365 | Not Available | Positive | 1467126 - 1467986 | 32037.3 |
| mechanosensitive ion channel protein | BSK71_06370 | Not Available | Negative | 1468067 - 1470520 | 88194.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
