Campylobacter coli strain VA38

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter coli strain VA38 is a Gram-negative, microaerophilic bacterium. It has a single replicon and is associated with several hosts, including Homo sapiens (humans), Gallus gallus (chickens), and Bos (cattle). This strain is implicated in various health effects, particularly gastrointestinal diseases, such as intestinal campylobacteriosis, enteritis, and acute bacterial enteritis. It is also associated with bloodstream infections and urinary tract infections, highlighting its potential to cause serious health issues. The presence of Campylobacter coli in both human and animal hosts underscores its ecological significance, particularly in the context of zoonotic transmission. The bacterium's ability to thrive in microaerophilic conditions suggests that it is well-adapted to the intestinal environments of its hosts, where oxygen levels are typically low. This adaptation may facilitate its survival and proliferation in the gastrointestinal tracts, leading to enteric disease. Given its role in diarrheal diseases, monitoring and understanding the transmission pathways of Campylobacter coli strain VA38 is critical for public health. The strain's presence in poultry and livestock suggests that agricultural practices may influence its prevalence and spread, emphasizing the need for effective food safety measures to mitigate the risk of Campylobacter infections in humans. The accession number for this strain is MPIW00000000.1.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter coli
Strainstrain VA38

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter coli strain VA38
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter coli strain VA38 Contig_746, whole genome shotgun

Gene Summary

Adenine Count

598683 bp

Thymine Count

611657 bp

Guanine Count

278021 bp

Cytosine Count

285552 bp

Genome Length

1773931 bp

Protein-coding Genes

1735 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
invasion proteinBOQ01_00245Not AvailablePositive44441 - 4585355842.2
5s ribosomal rnaNot AvailableNot AvailablePositive44711 - 44827Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive44971 - 47893Not Available
hypothetical proteinBOQ01_00255Not AvailablePositive46749 - 469316508.84
16s ribosomal rnaNot AvailableNot AvailablePositive48593 - 50110Not Available
primosomal protein n'BOQ01_00260Not AvailableNegative46964 - 4880270630.2
prepilinBOQ01_00265Not AvailableNegative48799 - 4924517225.0
hypothetical proteinBOQ01_00270Not AvailableNegative49242 - 494879222.3
hypothetical proteinBOQ01_00275Not AvailableNegative49477 - 497078875.56
excinuclease abc subunit bBOQ01_00280Not AvailablePositive49861 - 5183475867.6

Displaying genes 51 – 60 of 1786 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

Health ConditionRelationReference
Intestinal campylobacteriosisCausesPMC10942002
CampylobacteriosisCausesPMC11434686
Diarrheal diseasesCausesPMC11434686
EnteritisCausesPMC13255289
Bloodstream infectionsCausesPMC13255289
Urinary tract infectionsCausesPMC13255289
Bacterial enteritisCausesPMC4108124
Acute bacterial enteritisCausesPMC4108124
Enteric diseaseCausesPMC9565744
CampylobacteriosisCausesPMC9565744

Displaying health effects 1 – 10 of 12 in total