Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | Alphaproteobacteria bacterium MedPE-SWcel |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
773033 bp
Thymine Count
787079 bp
Guanine Count
1267457 bp
Cytosine Count
1248866 bp
Genome Length
4076435 bp
Protein-coding Genes
3612 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | BM562_00250 | Not Available | Negative | 53259 - 54323 | 37452.2 |
| 3-keto-5-aminohexanoate cleavage protein | BM562_00255 | Not Available | Negative | 54381 - 55214 | 30173.0 |
| protocatechuate 3,4-dioxygenase subunit alpha | BM562_00260 | Not Available | Negative | 55223 - 55840 | 22307.2 |
| protocatechuate 3,4-dioxygenase subunit beta | BM562_00265 | Not Available | Negative | 55843 - 56565 | 27185.6 |
| 4-carboxymuconolactone decarboxylase | BM562_00270 | Not Available | Negative | 56562 - 56984 | 15185.9 |
| 3-oxoadipate enol-lactonase | BM562_00275 | Not Available | Negative | 56974 - 57765 | 28232.0 |
| 4-hydroxybenzoate 3-monooxygenase | BM562_00280 | Not Available | Negative | 57765 - 58934 | 43522.6 |
| pca operon transcription factor pcaq | BM562_00285 | Not Available | Positive | 59016 - 59954 | 33991.4 |
| phosphonate monoester hydrolase | BM562_00290 | Not Available | Negative | 60270 - 61898 | 60787.9 |
| iclr family transcriptional regulator | BM562_00295 | Not Available | Positive | 62002 - 62799 | 29347.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
