Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | Alphaproteobacteria bacterium MedPE-SWcel |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
773033 bp
Thymine Count
787079 bp
Guanine Count
1267457 bp
Cytosine Count
1248866 bp
Genome Length
4076435 bp
Protein-coding Genes
3612 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | BM562_07520 | Not Available | Positive | 1666116 - 1667627 | 54538.1 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | BM562_07525 | Not Available | Positive | 1667727 - 1668707 | 36986.8 |
| aspartate aminotransferase family protein | BM562_07530 | Not Available | Positive | 1668760 - 1670172 | 52030.8 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | BM562_07535 | Not Available | Positive | 1670172 - 1671029 | 31040.7 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | BM562_07540 | Not Available | Positive | 1671026 - 1671832 | 28879.5 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | BM562_07545 | Not Available | Positive | 1671842 - 1672615 | 26921.2 |
| hypothetical protein | BM562_07550 | Not Available | Negative | 1672726 - 1673055 | 12525.1 |
| hypothetical protein | BM562_07555 | Not Available | Negative | 1673187 - 1674818 | 59666.1 |
| aspartate-semialdehyde dehydrogenase | BM562_07560 | Not Available | Negative | 1674930 - 1675952 | 37360.7 |
| carbonic anhydrase | BM562_07565 | Not Available | Negative | 1676323 - 1676973 | 23996.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
