Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 708 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1385987 bp
Thymine Count
1388097 bp
Guanine Count
1418668 bp
Cytosine Count
1420601 bp
Genome Length
5614377 bp
Protein-coding Genes
5173 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK373_21180 | Not Available | Positive | 4254690 - 4255247 | 19787.7 |
| mfs transporter | BK373_21185 | Not Available | Negative | 4255251 - 4256468 | 42160.3 |
| permease | BK373_21190 | Not Available | Positive | 4256600 - 4257649 | 38538.8 |
| acp synthase | BK373_21195 | Not Available | Positive | 4257704 - 4258291 | 21724.8 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | BK373_21200 | Not Available | Positive | 4258402 - 4259976 | 58731.3 |
| nickel abc transporter permease subunit nikb | BK373_21205 | Not Available | Positive | 4259976 - 4260920 | 35231.2 |
| nickel abc transporter permease subunit nikc | BK373_21210 | Not Available | Positive | 4260917 - 4261750 | 30363.8 |
| nickel import atp-binding protein nikd | BK373_21215 | Not Available | Positive | 4261750 - 4262514 | 26812.2 |
| nickel import atp-binding protein nike | BK373_21220 | Not Available | Positive | 4262511 - 4263317 | 29695.5 |
| nickel responsive regulator | BK373_21225 | Not Available | Positive | 4263323 - 4263724 | 15094.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





