Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 708 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1385987 bp
Thymine Count
1388097 bp
Guanine Count
1418668 bp
Cytosine Count
1420601 bp
Genome Length
5614377 bp
Protein-coding Genes
5173 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK373_20420 | Not Available | Positive | 4098986 - 4099084 | 3889.72 |
| glutamate decarboxylase | BK373_20425 | Not Available | Positive | 4099095 - 4100495 | 52671.0 |
| glutamate:gamma-aminobutyrate antiporter | BK373_20430 | Not Available | Positive | 4100651 - 4102186 | 55097.9 |
| hypothetical protein | BK373_20435 | Not Available | Positive | 4102482 - 4103636 | 43817.7 |
| diguanylate cyclase | BK373_20440 | Not Available | Positive | 4104012 - 4105394 | 53209.8 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | BK373_20445 | Not Available | Positive | 4105395 - 4107824 | 91434.0 |
| osmc family peroxiredoxin | BK373_20450 | Not Available | Negative | 4108014 - 4108445 | 15117.0 |
| biofilm-dependent modulation protein | BK373_20455 | Not Available | Positive | 4108790 - 4109005 | 7988.24 |
| 30s ribosomal subunit s22 | BK373_20460 | Not Available | Positive | 4109107 - 4109244 | 5096.13 |
| nad-dependent malic enzyme | BK373_20465 | Not Available | Positive | 4109401 - 4111098 | 63176.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





