Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 708 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1385987 bp
Thymine Count
1388097 bp
Guanine Count
1418668 bp
Cytosine Count
1420601 bp
Genome Length
5614377 bp
Protein-coding Genes
5173 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase adaptor protein rapz | BK373_10105 | Not Available | Negative | 2055461 - 2056315 | 32494.2 |
| pts iia-like nitrogen regulatory protein ptsn | BK373_10110 | Not Available | Negative | 2056361 - 2056852 | 17960.6 |
| ribosomal subunit interface protein | BK373_10115 | Not Available | Negative | 2056970 - 2057257 | 10750.9 |
| rna polymerase factor sigma-54 | BK373_10120 | Not Available | Negative | 2057280 - 2058713 | 53996.8 |
| lps export abc transporter atp-binding protein | BK373_10125 | Not Available | Negative | 2058761 - 2059486 | 26802.3 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | BK373_10130 | Not Available | Negative | 2059493 - 2060050 | 20128.1 |
| lps export abc transporter periplasmic protein lptc | BK373_10135 | Not Available | Negative | 2060019 - 2060594 | 21703.8 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | BK373_10140 | Not Available | Negative | 2060591 - 2061157 | 20016.3 |
| d-arabinose 5-phosphate isomerase | BK373_10145 | Not Available | Negative | 2061178 - 2062164 | 35197.4 |
| calcium/sodium antiporter | BK373_10150 | Not Available | Negative | 2062178 - 2063155 | 34756.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





