Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 708 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1385987 bp
Thymine Count
1388097 bp
Guanine Count
1418668 bp
Cytosine Count
1420601 bp
Genome Length
5614377 bp
Protein-coding Genes
5173 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | BK373_09590 | Not Available | Negative | 1945993 - 1946787 | 29332.5 |
| 30s ribosomal protein s2 | BK373_09595 | Not Available | Positive | 1947155 - 1947880 | 26745.2 |
| translation elongation factor ts | BK373_09600 | Not Available | Positive | 1948138 - 1948989 | 30424.7 |
| ump kinase | BK373_09605 | Not Available | Positive | 1949136 - 1949861 | 25971.9 |
| ribosome recycling factor | BK373_09610 | Not Available | Positive | 1950153 - 1950710 | 20639.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | BK373_09615 | Not Available | Positive | 1950802 - 1951998 | 43390.5 |
| (2e,6e)-farnesyl- diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | BK373_09620 | Not Available | Positive | 1952187 - 1952945 | 28314.5 |
| phosphatidate cytidylyltransferase | BK373_09625 | Not Available | Positive | 1952958 - 1953815 | 31511.7 |
| rip metalloprotease rsep | BK373_09630 | Not Available | Positive | 1953827 - 1955179 | 49088.3 |
| outer membrane protein assembly factor bama | BK373_09635 | Not Available | Positive | 1955209 - 1957641 | 90557.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





