Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage resistance protein | BK334_02910 | Not Available | Positive | 586758 - 588314 | 58589.6 |
| abc transporter substrate-binding protein | BK334_02915 | Not Available | Positive | 588396 - 590210 | 69710.6 |
| microcin c abc transporter permease yejb | BK334_02920 | Not Available | Positive | 590211 - 591305 | 40392.7 |
| microcin abc transporter permease | BK334_02925 | Not Available | Positive | 591305 - 592330 | 38109.7 |
| microcin c abc transporter atp-binding protein yejf | BK334_02930 | Not Available | Positive | 592332 - 593921 | 58650.7 |
| hypothetical protein | BK334_02935 | Not Available | Negative | 593925 - 594269 | 12525.9 |
| bcr/cfla family drug resistance efflux transporter | BK334_02940 | Not Available | Negative | 594602 - 595792 | 43355.4 |
| 16s rrna pseudouridine(516) synthase | BK334_02945 | Not Available | Negative | 595820 - 596515 | 25866.8 |
| atp-dependent helicase | BK334_02950 | Not Available | Positive | 596665 - 598425 | 66490.0 |
| 50s ribosomal protein l25 | BK334_02955 | Not Available | Positive | 598550 - 598834 | 10693.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





