Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK334_02810 | Not Available | Negative | 564821 - 565702 | 32725.7 |
| hypothetical protein | BK334_02815 | Not Available | Positive | 565801 - 566850 | 36884.3 |
| deoxyribonuclease iv | BK334_02820 | Not Available | Positive | 566924 - 567781 | 31492.2 |
| kinase | BK334_02825 | Not Available | Positive | 567784 - 568872 | 39662.5 |
| nucleoside permease | BK334_02830 | Not Available | Negative | 568928 - 570178 | 43410.2 |
| ribonucleoside hydrolase | BK334_02835 | Not Available | Negative | 570278 - 571219 | 33813.1 |
| transcriptional regulator yeil | BK334_02840 | Not Available | Positive | 571349 - 572047 | 26842.6 |
| nucleoside permease | BK334_02845 | Not Available | Negative | 572116 - 573366 | 43492.4 |
| pseudouridine-5-phosphate glycosidase | BK334_02850 | Not Available | Negative | 573460 - 574398 | 32947.8 |
| pseudouridine kinase | BK334_02855 | Not Available | Negative | 574386 - 575327 | 33674.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





