Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK334_02605 | Not Available | Positive | 521882 - 524161 | 83618.9 |
| hypothetical protein | BK334_02610 | Not Available | Positive | 524154 - 525290 | 42171.7 |
| hypothetical protein | BK334_02615 | Not Available | Positive | 525287 - 527287 | 73552.1 |
| hypothetical protein | BK334_02620 | Not Available | Positive | 527412 - 527873 | 16623.0 |
| hypothetical protein | BK334_02625 | Not Available | Negative | 527914 - 528384 | 18003.9 |
| two-component system response regulator yeht | BK334_02630 | Not Available | Negative | 528431 - 529150 | 27429.4 |
| sensor histidine kinase | BK334_02635 | Not Available | Negative | 529147 - 530832 | 62126.3 |
| transcriptional regulator | BK334_02640 | Not Available | Positive | 531054 - 531785 | 28056.8 |
| hypothetical protein | BK334_02645 | Not Available | Positive | 531845 - 531952 | 3642.85 |
| osmoprotectant uptake system permease | BK334_02650 | Not Available | Negative | 531933 - 532664 | 25558.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





