Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | BK334_02505 | Not Available | Negative | 497967 - 498713 | 28264.8 |
| hypothetical protein | BK334_02510 | Not Available | Negative | 498765 - 499583 | 31680.8 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | BK334_02515 | Not Available | Negative | 499648 - 500448 | 28635.2 |
| hydroxyethylthiazole kinase | BK334_02520 | Not Available | Negative | 500445 - 501233 | 27408.9 |
| transcriptional repressor rcnr to maintain nickel and cobalt homeostasis | BK334_02525 | Not Available | Negative | 501456 - 501728 | 10134.5 |
| nickel/cobalt efflux protein rcna | BK334_02530 | Not Available | Positive | 501849 - 502652 | 29601.4 |
| heavy metal resistance protein | BK334_02535 | Not Available | Positive | 502871 - 503209 | 12466.8 |
| pilus assembly protein | BK334_02540 | Not Available | Negative | 503291 - 504325 | 37287.6 |
| fimbrial assembly protein | BK334_02545 | Not Available | Negative | 504336 - 506816 | 92296.1 |
| fimbrial assembly protein | BK334_02550 | Not Available | Negative | 506832 - 507506 | 24776.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





