Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | BK334_02355 | Not Available | Positive | 461210 - 464527 | 123952.0 |
| dna-3-methyladenine glycosylase 2 | BK334_02360 | Not Available | Negative | 464565 - 465422 | 31671.2 |
| molecular chaperone | BK334_02365 | Not Available | Positive | 465556 - 466908 | 49259.0 |
| hypothetical protein | BK334_02370 | Not Available | Negative | 466921 - 468861 | 71375.5 |
| hypothetical protein | BK334_02375 | Not Available | Negative | 468858 - 469538 | 24372.2 |
| hypothetical protein | BK334_02380 | Not Available | Negative | 469616 - 470275 | 24152.8 |
| multidrug transporter subunit mdta | BK334_02385 | Not Available | Positive | 471164 - 472411 | 44530.9 |
| multidrug transporter subunit mdtb | BK334_02390 | Not Available | Positive | 472411 - 475533 | 112118.0 |
| multidrug transporter subunit mdtc | BK334_02395 | Not Available | Positive | 475534 - 478611 | 110977.0 |
| multidrug transporter subunit mdtd | BK334_02400 | Not Available | Positive | 478612 - 480027 | 50903.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





