Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcompartment protein | BK334_02005 | Not Available | Positive | 389398 - 389820 | 14366.4 |
| propanediol utilization protein | BK334_02010 | Not Available | Positive | 389823 - 390455 | 22957.8 |
| microcompartment protein pdum | BK334_02015 | Not Available | Positive | 390452 - 390943 | 18795.2 |
| ethanolamine utilization protein eutn | BK334_02020 | Not Available | Positive | 390947 - 391222 | 9260.25 |
| atp:cob(i)alamin adenosyltransferase | BK334_02025 | Not Available | Positive | 391234 - 392241 | 36842.1 |
| aldehyde dehydrogenase eute | BK334_02030 | Not Available | Positive | 392238 - 393623 | 49092.3 |
| propanediol utilization protein | BK334_02035 | Not Available | Positive | 393634 - 394746 | 39658.0 |
| nadh dehydrogenase | BK334_02040 | Not Available | Positive | 394743 - 396086 | 48028.2 |
| propanediol utilization protein | BK334_02045 | Not Available | Positive | 396089 - 396643 | 19154.6 |
| propanediol utilization protein | BK334_02050 | Not Available | Positive | 396643 - 396993 | 12414.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





