Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn/fad transporter | BK334_01905 | Not Available | Negative | 371856 - 373310 | 52788.1 |
| Trna-asn | Not Available | Not Available | Positive | 373504 - 373579 | Not Available |
| transcriptional regulator cbl | BK334_01915 | Not Available | Negative | 373617 - 374567 | 35846.1 |
| nitrogen assimilation transcriptional regulator | BK334_01920 | Not Available | Negative | 374669 - 375586 | 32840.1 |
| Trna-asn | Not Available | Not Available | Positive | 375912 - 375987 | Not Available |
| l,d-transpeptidase | BK334_01930 | Not Available | Negative | 376043 - 376975 | 34278.0 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | BK334_01935 | Not Available | Negative | 377040 - 378119 | 36960.3 |
| adenosylcobinamide-gdp ribazoletransferase | BK334_01940 | Not Available | Negative | 378131 - 378874 | 26397.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | BK334_01945 | Not Available | Negative | 378871 - 379416 | 20137.1 |
| cobalamin biosynthesis protein | BK334_01950 | Not Available | Negative | 379550 - 379987 | 15731.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





