Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BK334_01745 | Not Available | Positive | 337578 - 338201 | 23517.8 |
| hypothetical protein | BK334_01750 | Not Available | Negative | 338245 - 338433 | 6946.22 |
| hypothetical protein | BK334_01755 | Not Available | Positive | 338596 - 338823 | 8579.66 |
| mannosyl-3-phosphoglycerate phosphatase | BK334_01760 | Not Available | Positive | 339121 - 339936 | 30401.9 |
| diguanylate cyclase | BK334_01765 | Not Available | Negative | 339933 - 341609 | 63494.6 |
| duf2158 domain-containing protein | BK334_01770 | Not Available | Negative | 341798 - 341980 | 6664.82 |
| hypothetical protein | BK334_01775 | Not Available | Negative | 342059 - 342976 | 32109.7 |
| drug/metabolite exporter yeda | BK334_01780 | Not Available | Positive | 343149 - 344069 | 32196.0 |
| very short patch repair endonuclease | BK334_01785 | Not Available | Negative | 344058 - 344528 | 17986.6 |
| dna (cytosine-5-)-methyltransferase | BK334_01790 | Not Available | Negative | 344509 - 345927 | 53523.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





