Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator sdia | BK334_01585 | Not Available | Negative | 311158 - 311880 | 28036.8 |
| l-cystine abc transporter atp-binding protein yecc | BK334_01590 | Not Available | Negative | 312110 - 312862 | 27677.7 |
| amino acid abc transporter permease | BK334_01595 | Not Available | Negative | 312859 - 313527 | 24802.7 |
| d-cysteine desulfhydrase | BK334_01600 | Not Available | Negative | 313542 - 314528 | 35167.4 |
| cystine abc transporter substrate-binding protein | BK334_01605 | Not Available | Negative | 314633 - 315433 | 28938.8 |
| flagellar regulatory protein fliz | BK334_01610 | Not Available | Negative | 315521 - 316072 | 21561.9 |
| rna polymerase sigma factor flia | BK334_01615 | Not Available | Negative | 316118 - 316837 | 27522.8 |
| flagellin | BK334_01620 | Not Available | Negative | 317157 - 318437 | 44109.8 |
| flagellar filament capping protein flid | BK334_01625 | Not Available | Positive | 318683 - 320098 | 48873.3 |
| flagellar export chaperone flis | BK334_01630 | Not Available | Positive | 320114 - 320524 | 15052.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





