Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal subunit s22 | BK334_01435 | Not Available | Positive | 280682 - 280819 | 5096.13 |
| nad-dependent malic enzyme | BK334_01440 | Not Available | Positive | 280976 - 282673 | 63156.9 |
| alcohol dehydrogenase adhp | BK334_01445 | Not Available | Positive | 282807 - 283817 | 35373.6 |
| addiction module antidote protein, higa family | BK334_01450 | Not Available | Positive | 283963 - 284247 | 10401.7 |
| formate dehydrogenase subunit gamma | BK334_01455 | Not Available | Negative | 284298 - 284951 | 25370.0 |
| formate dehydrogenase subunit beta | BK334_01460 | Not Available | Negative | 284944 - 285828 | 32281.5 |
| formate dehydrogenase-n subunit alpha | BK334_01465 | Not Available | Negative | 285841 - 288252 | 89810.8 |
| sulfate abc transporter substrate-binding protein | BK334_01470 | Not Available | Negative | 288301 - 288888 | 21451.7 |
| eama family transporter | BK334_01475 | Not Available | Positive | 289177 - 290001 | 29464.7 |
| phosphoporin phoe | BK334_01480 | Not Available | Positive | 290259 - 291359 | 41012.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





