Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK334_01230 | Not Available | Positive | 226944 - 227858 | 34814.0 |
| trans-aconitate 2-methyltransferase | BK334_01235 | Not Available | Negative | 227862 - 228620 | 28999.4 |
| autoinducer-2 (ai-2) modifying protein lsrg | BK334_01240 | Not Available | Negative | 228677 - 228967 | 11239.4 |
| autoinducer 2 aldolase | BK334_01245 | Not Available | Negative | 228991 - 229866 | 31865.6 |
| autoinducer 2 abc transporter substrate-binding protein | BK334_01250 | Not Available | Negative | 229893 - 230915 | 36714.9 |
| histidine kinase | BK334_01255 | Not Available | Negative | 230927 - 231919 | 34470.6 |
| autoinducer 2 abc transporter permease lsrc | BK334_01260 | Not Available | Negative | 231919 - 232947 | 36507.3 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 233188 - 233295 | Not Available |
| autoinducer 2 abc transporter atp-binding protein lsra | BK334_01265 | Not Available | Negative | 232941 - 234476 | 55714.7 |
| transcriptional regulator lsrr | BK334_01270 | Not Available | Positive | 234725 - 235678 | 33828.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





