Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress protection protein marc | BK334_01180 | Not Available | Positive | 216569 - 217234 | 23618.7 |
| sugar transporter | BK334_01185 | Not Available | Negative | 217259 - 218449 | 42540.8 |
| hypothetical protein | BK334_01190 | Not Available | Negative | 218599 - 219714 | 42910.8 |
| lysr family transcriptional regulator | BK334_01195 | Not Available | Negative | 219792 - 220673 | 32402.8 |
| succinate-semialdehyde dehydrogenase | BK334_01200 | Not Available | Positive | 220774 - 222162 | 49791.8 |
| glutaminase | BK334_01205 | Not Available | Positive | 222226 - 223152 | 33517.6 |
| duf4186 domain-containing protein | BK334_01210 | Not Available | Positive | 223152 - 223511 | 13602.6 |
| diguanylate cyclase | BK334_01215 | Not Available | Positive | 223650 - 225068 | 52103.4 |
| altronate oxidoreductase | BK334_01220 | Not Available | Positive | 225296 - 226747 | 54825.3 |
| hypothetical protein | BK334_01225 | Not Available | Negative | 226830 - 226994 | 6465.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





