Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | Positive | 204750 - 204918 | Not Available |
| dipeptidyl carboxypeptidase ii | BK334_01130 | Not Available | Positive | 208568 - 210613 | 77518.9 |
| tigr00156 family protein | BK334_01140 | Not Available | Positive | 210979 - 211371 | 14081.9 |
| diguanylate cyclase | BK334_01145 | Not Available | Positive | 211626 - 212516 | 33946.5 |
| hypothetical protein | BK334_01150 | Not Available | Negative | 212735 - 212830 | 3509.36 |
| transporter | BK334_01155 | Not Available | Negative | 212957 - 214144 | 42649.5 |
| o-acetylserine/cysteine exporter | BK334_01160 | Not Available | Positive | 214339 - 215238 | 32312.2 |
| multiple antibiotic resistance regulatory periplasmic protein marb | BK334_01165 | Not Available | Negative | 215269 - 215487 | 7633.1 |
| mdr efflux pump acrab transcriptional activator mara | BK334_01170 | Not Available | Negative | 215519 - 215908 | 15417.3 |
| transcriptional regulator | BK334_01175 | Not Available | Negative | 215923 - 216357 | 16128.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





