Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | BK334_00385 | Not Available | Positive | 75978 - 76535 | 20092.8 |
| aldehyde dehydrogenase puuc | BK334_00390 | Not Available | Positive | 76685 - 78172 | 53522.6 |
| gamma-glutamylputrescine oxidoreductase | BK334_00395 | Not Available | Positive | 78174 - 79454 | 47144.2 |
| 4-aminobutyrate transaminase | BK334_00400 | Not Available | Positive | 79492 - 80757 | 44759.8 |
| phage shock protein operon transcriptional activator | BK334_00405 | Not Available | Negative | 80877 - 81854 | 36974.7 |
| phage shock protein pspa | BK334_00410 | Not Available | Positive | 82021 - 82689 | 25536.5 |
| phage shock protein b | BK334_00415 | Not Available | Positive | 82743 - 82967 | 8763.59 |
| dna-binding transcriptional activator pspc | BK334_00420 | Not Available | Positive | 82967 - 83326 | 13517.7 |
| phage shock protein d | BK334_00425 | Not Available | Positive | 83335 - 83556 | 8042.22 |
| thiosulfate sulfurtransferase pspe | BK334_00430 | Not Available | Positive | 83631 - 83945 | 11461.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





