Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK334_27955 | Not Available | Negative | 5493017 - 5493604 | 21871.6 |
| dini family protein | BK334_27960 | Not Available | Negative | 5493951 - 5494184 | 9160.16 |
| hypothetical protein | BK334_27965 | Not Available | Positive | 5494208 - 5494579 | 13875.7 |
| hypothetical protein | BK334_27970 | Not Available | Positive | 5494707 - 5495147 | 16701.1 |
| hypothetical protein | BK334_27985 | Not Available | Negative | 5495903 - 5496400 | 17445.8 |
| hypothetical protein | BK334_27995 | Not Available | Positive | 5496746 - 5497054 | 11277.6 |
| dna-binding protein | BK334_28000 | Not Available | Positive | 5497363 - 5497563 | 7462.28 |
| phenylacetate--coa ligase | BK334_28020 | Not Available | Negative | 5499860 - 5500980 | 41317.7 |
| primosome assembly protein pria | BK334_28030 | Not Available | Positive | 5501245 - 5501895 | 23977.5 |
| hypothetical protein | BK334_28055 | Not Available | Negative | 5505085 - 5505687 | 22886.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





