Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transactivation protein | BK334_27405 | Not Available | Negative | 5424964 - 5425464 | 18956.9 |
| phage tail protein | BK334_27420 | Not Available | Positive | 5426054 - 5426446 | 14082.4 |
| hypothetical protein | BK334_27425 | Not Available | Negative | 5426481 - 5426978 | 19087.1 |
| phage tail protein | BK334_27430 | Not Available | Positive | 5427364 - 5427789 | 15328.6 |
| phage tail protein | BK334_27435 | Not Available | Negative | 5427795 - 5428406 | 22222.7 |
| is4 family transposase | BK334_27440 | Not Available | Negative | 5428870 - 5429820 | 35160.0 |
| phage tail protein | BK334_27445 | Not Available | Positive | 5429840 - 5430298 | 16685.9 |
| phage tail protein | BK334_27450 | Not Available | Positive | 5430298 - 5430912 | 22271.7 |
| hypothetical protein | BK334_27455 | Not Available | Negative | 5430919 - 5431179 | 9532.04 |
| phage tail protein | BK334_27465 | Not Available | Negative | 5431442 - 5431915 | 17172.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





