Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK334_26990 | Not Available | Negative | 5351602 - 5351868 | 9763.97 |
| glycoprotein 3 | BK334_26995 | Not Available | Positive | 5352420 - 5353025 | 22688.9 |
| hypothetical protein | BK334_27000 | Not Available | Negative | 5353230 - 5353685 | 17727.1 |
| derepression protein | BK334_27005 | Not Available | Negative | 5353678 - 5353965 | 10937.0 |
| ash family protein | BK334_27010 | Not Available | Negative | 5353958 - 5354548 | 21133.8 |
| hypothetical protein | BK334_27015 | Not Available | Negative | 5354545 - 5354811 | 9763.97 |
| glycoprotein 3 | BK334_27020 | Not Available | Positive | 5355364 - 5355969 | 22657.9 |
| dna primase | BK334_27025 | Not Available | Negative | 5355970 - 5358071 | 75911.5 |
| hypothetical protein | BK334_27030 | Not Available | Negative | 5358086 - 5358358 | 9938.13 |
| endodeoxyribonuclease | BK334_27035 | Not Available | Positive | 5358365 - 5358685 | 12265.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





