Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycik family oxidoreductase | BK334_00185 | Not Available | Negative | 35205 - 35963 | 27935.6 |
| hypothetical protein | BK334_00190 | Not Available | Negative | 36007 - 36171 | 6495.23 |
| protease sohb | BK334_00195 | Not Available | Positive | 36183 - 37232 | 39382.8 |
| hypothetical protein | BK334_00200 | Not Available | Negative | 37268 - 37519 | 9386.17 |
| hypothetical protein | BK334_00205 | Not Available | Positive | 37624 - 37776 | 5722.1 |
| dna topoisomerase i | BK334_00210 | Not Available | Positive | 37899 - 40496 | 97356.0 |
| transcriptional regulator cysb | BK334_00215 | Not Available | Positive | 40706 - 41680 | 36124.5 |
| hypothetical protein | BK334_00220 | Not Available | Positive | 42011 - 42139 | 4880.08 |
| hypothetical protein | BK334_00225 | Not Available | Positive | 42142 - 42309 | 6334.2 |
| hypothetical protein | BK334_00230 | Not Available | Negative | 42383 - 42508 | 4872.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





