Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK334_25030 | Not Available | Positive | 5003162 - 5003431 | 9852.45 |
| Pmgc | BK334_25035 | Not Available | Positive | 5003490 - 5004056 | 21019.2 |
| Major tail tube protein tubb | BK334_25040 | Not Available | Positive | 5004067 - 5004678 | 22318.7 |
| Pmgb | BK334_25045 | Not Available | Positive | 5004693 - 5005574 | 34114.5 |
| Tail tape measure protein | BK334_25050 | Not Available | Positive | 5005656 - 5009048 | 119548.0 |
| Pmga | BK334_25055 | Not Available | Positive | 5009048 - 5009404 | 13240.7 |
| Putative baseplate structural protein | BK334_25060 | Not Available | Positive | 5009401 - 5010834 | 53564.3 |
| Putative tail tube protein | BK334_25065 | Not Available | Positive | 5010834 - 5011670 | 31478.5 |
| Tail fiber protein r | BK334_25070 | Not Available | Positive | 5011749 - 5012183 | 15947.0 |
| Tail fiber repeat family protein | BK334_25075 | Not Available | Positive | 5012195 - 5013220 | 35883.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





