Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Base plate protein gp5 | BK334_24880 | Not Available | Positive | 4975434 - 4976066 | 21643.6 |
| Dbn | BK334_24885 | Not Available | Negative | 4976113 - 4977111 | 37394.7 |
| Ban | BK334_24890 | Not Available | Negative | 4977111 - 4978475 | 50467.1 |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | Positive | 4978762 - 4978837 | Not Available |
| Putative serine protease | BK334_24900 | Not Available | Negative | 4978865 - 4979692 | 30186.3 |
| Hypothetical protein | BK334_24905 | Not Available | Negative | 4979673 - 4979909 | 9033.47 |
| Conserved protein of unknown function upl | BK334_24910 | Not Available | Positive | 4980102 - 4980293 | 7035.67 |
| Trna,type:thr,anti_codon:tgt; | Not Available | Not Available | Positive | 4980838 - 4980913 | Not Available |
| Trna,type:asn,anti_codon:gtt; | Not Available | Not Available | Positive | 4980916 - 4980991 | Not Available |
| Dna adenine methylase family protein | BK334_24925 | Not Available | Negative | 4981667 - 4984255 | 94442.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





