Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Prevention of host death by doc toxicity | BK334_24730 | Not Available | Negative | 4956658 - 4956879 | 8133.53 |
| Putative dna repair protein | BK334_24735 | Not Available | Negative | 4956952 - 4957341 | 14268.8 |
| Dna polymerase iii subunit theta | BK334_24740 | Not Available | Negative | 4957465 - 4957716 | 9695.45 |
| Pmgv | BK334_24745 | Not Available | Negative | 4958378 - 4958740 | 13977.1 |
| Hypothetical protein | BK334_24750 | Not Available | Negative | 4958737 - 4959654 | 34025.7 |
| Hypothetical protein | BK334_24755 | Not Available | Negative | 4959651 - 4960025 | 14637.1 |
| Hypothetical protein | BK334_24760 | Not Available | Negative | 4960032 - 4960325 | 11409.5 |
| Hypothetical protein | BK334_24765 | Not Available | Negative | 4960504 - 4960737 | 8622.07 |
| Hypothetical protein | BK334_24770 | Not Available | Negative | 4960820 - 4961707 | 32637.1 |
| Hypothetical protein | BK334_24775 | Not Available | Negative | 4961704 - 4962219 | 19400.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





