Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Recombinase | BK334_24680 | Not Available | Negative | 4948658 - 4949689 | 38584.4 |
| Putative cre-associated regulatory protein | BK334_24685 | Not Available | Negative | 4949697 - 4949918 | 8662.33 |
| C1 repressor inactivator | BK334_24690 | Not Available | Positive | 4950523 - 4950732 | 7742.8 |
| Repressor protein c1 | BK334_24695 | Not Available | Positive | 4950843 - 4951694 | 32501.0 |
| Putative large terminase protein | BK334_24700 | Not Available | Negative | 4951719 - 4953203 | 55562.7 |
| Terminase a protein | BK334_24705 | Not Available | Negative | 4953203 - 4954396 | 45344.6 |
| Late promoter-activating protein lpa | BK334_24710 | Not Available | Negative | 4954482 - 4954934 | 18118.8 |
| Hypothetical protein | BK334_24715 | Not Available | Negative | 4955023 - 4956066 | 39807.9 |
| Pdca | BK334_24720 | Not Available | Negative | 4956094 - 4956273 | 6803.75 |
| Toxin protein | BK334_24725 | Not Available | Negative | 4956278 - 4956658 | 13589.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





