Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | BK334_23990 | Not Available | Negative | 4798272 - 4798454 | 7057.84 |
| Hypothetical protein | BK334_23995 | Not Available | Negative | 4798583 - 4798894 | 12060.7 |
| Hypothetical protein | BK334_24000 | Not Available | Negative | 4798887 - 4799141 | 9636.61 |
| Lygf | BK334_24005 | Not Available | Negative | 4799138 - 4799560 | 16283.6 |
| Replication protein | BK334_24010 | Not Available | Negative | 4799601 - 4800488 | 33270.2 |
| Cii protein | BK334_24015 | Not Available | Negative | 4800586 - 4801011 | 16149.5 |
| Putative cro anti-repressor | BK334_24020 | Not Available | Negative | 4801008 - 4801223 | 8226.94 |
| Putative ci repressor | BK334_24025 | Not Available | Positive | 4801273 - 4801989 | 26392.8 |
| Hypothetical protein | BK334_24030 | Not Available | Positive | 4802181 - 4802417 | 8494.83 |
| hypothetical protein | BK334_24035 | Not Available | Positive | 4802577 - 4802795 | 8409.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





