Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head-tail joining protein | BK334_22560 | Not Available | Positive | 4521567 - 4521773 | 7613.19 |
| Capsid component | BK334_22565 | Not Available | Positive | 4521770 - 4523371 | 59465.0 |
| Capsid component | BK334_22570 | Not Available | Positive | 4523352 - 4524671 | 45928.4 |
| Head-dna stabilization protein | BK334_22575 | Not Available | Positive | 4524681 - 4525013 | 11572.5 |
| Capsid component | BK334_22580 | Not Available | Positive | 4525069 - 4526094 | 38155.4 |
| Dna packaging protein | BK334_22585 | Not Available | Positive | 4526097 - 4526534 | 15756.6 |
| Head-tail joining protein | BK334_22590 | Not Available | Positive | 4526546 - 4526899 | 12761.8 |
| Tail component | BK334_22595 | Not Available | Positive | 4526911 - 4527489 | 21590.0 |
| Tail component | BK334_22600 | Not Available | Positive | 4527486 - 4527881 | 14649.9 |
| Major tail protein v | BK334_22605 | Not Available | Positive | 4527889 - 4528629 | 25750.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





