Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative transposase b subunit | BK334_20170 | Not Available | Negative | 4099213 - 4100379 | 42854.9 |
| Integrase core domain protein | BK334_20175 | Not Available | Negative | 4100390 - 4102159 | 64539.7 |
| Gp41 | BK334_20180 | Not Available | Negative | 4102163 - 4103074 | 33567.0 |
| Hypothetical protein | BK334_20185 | Not Available | Negative | 4103085 - 4103393 | 10981.3 |
| Hypothetical protein | BK334_20190 | Not Available | Negative | 4103446 - 4103634 | 7058.41 |
| Helix-turn-helix transcriptional regulator | BK334_20195 | Not Available | Positive | 4103735 - 4104073 | 12471.2 |
| Dna adenine methylase | BK334_20200 | Not Available | Negative | 4104190 - 4104954 | 29453.8 |
| hypothetical protein | BK334_20205 | Not Available | Negative | 4105146 - 4105361 | 8194.75 |
| Hypothetical protein | BK334_20210 | Not Available | Positive | 4105360 - 4105764 | 15424.7 |
| hypothetical protein | BK334_20215 | Not Available | Negative | 4105740 - 4106483 | 27617.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





