Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail assembly chaperone | BK334_00040 | Not Available | Positive | 3974 - 4345 | 13960.7 |
| rrna,type:5s | Not Available | Not Available | Positive | 4253 - 4368 | 18.01 |
| Phage tail protein | BK334_00045 | Not Available | Positive | 4369 - 4647 | 10254.3 |
| Putative tail component | BK334_00050 | Not Available | Positive | 4694 - 7921 | 115493.0 |
| Trna-arg; | Not Available | Not Available | Positive | 5760 - 5832 | Not Available |
| Minor tail protein | BK334_00055 | Not Available | Positive | 7914 - 8255 | 13184.6 |
| Tail component | BK334_00060 | Not Available | Positive | 8255 - 8953 | 25623.9 |
| Tail fiber component | BK334_00065 | Not Available | Positive | 8959 - 9702 | 28466.4 |
| Putative tail component | BK334_00070 | Not Available | Positive | 9639 - 10247 | 21286.8 |
| Putative tail tip assembly protein | BK334_00075 | Not Available | Positive | 10308 - 13787 | 127388.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





