Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Rna-directed dna polymerase | BK334_18170 | Not Available | Negative | 3703247 - 3704197 | 36322.9 |
| Hypothetical protein | BK334_18175 | Not Available | Negative | 3704520 - 3704813 | 11194.5 |
| Replication protein | BK334_18180 | Not Available | Negative | 3705093 - 3707381 | 86641.2 |
| Hypothetical protein | BK334_18185 | Not Available | Negative | 3707371 - 3707646 | 10160.1 |
| Dksa-like zinc finger domain containing protein | BK334_18190 | Not Available | Negative | 3707643 - 3707867 | 8339.98 |
| Hypothetical protein | BK334_18195 | Not Available | Negative | 3707867 - 3708169 | 11342.8 |
| Hypothetical protein | BK334_18200 | Not Available | Negative | 3708169 - 3708393 | 8308.9 |
| Gpb | BK334_18205 | Not Available | Negative | 3708457 - 3708957 | 20054.3 |
| Hypothetical protein | BK334_18210 | Not Available | Negative | 3708954 - 3709151 | 7615.66 |
| Ribosomal protein s15p/s13e | BK334_18215 | Not Available | Negative | 3709135 - 3709506 | 14046.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





