Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | BK334_18120 | Not Available | Negative | 3695455 - 3695658 | 7053.42 |
| Head completion/stabilization protein | BK334_18125 | Not Available | Negative | 3695658 - 3696167 | 19088.9 |
| Gpm | BK334_18130 | Not Available | Negative | 3696267 - 3697010 | 27397.6 |
| Major capsid protein precursor | BK334_18135 | Not Available | Negative | 3697014 - 3698087 | 40298.9 |
| Capsid scaffolding protein | BK334_18140 | Not Available | Negative | 3698146 - 3699000 | 31442.2 |
| Gpp | BK334_18145 | Not Available | Positive | 3699174 - 3700946 | 66588.2 |
| Capsid portal protein | BK334_18150 | Not Available | Positive | 3700946 - 3701980 | 39112.7 |
| hypothetical protein | BK334_18155 | Not Available | Negative | 3702128 - 3702340 | 7808.82 |
| Hypothetical protein | BK334_18160 | Not Available | Negative | 3702493 - 3702687 | 7419.91 |
| Hypothetical protein | BK334_18165 | Not Available | Positive | 3702686 - 3703123 | 15858.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





