Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate assembly protein j | BK334_18070 | Not Available | Negative | 3690842 - 3691750 | 32808.8 |
| Baseplate wedge subunit | BK334_18075 | Not Available | Negative | 3691755 - 3692102 | 12638.3 |
| Baseplate protein | BK334_18080 | Not Available | Negative | 3692099 - 3692734 | 22313.6 |
| Tail completion protein | BK334_18085 | Not Available | Negative | 3692801 - 3693253 | 17227.9 |
| Tail completion protein | BK334_18090 | Not Available | Negative | 3693246 - 3693713 | 17392.8 |
| Phage outer membrane lipoprotein rz1 | BK334_18095 | Not Available | Negative | 3693676 - 3693834 | 5626.44 |
| Lysin | BK334_18100 | Not Available | Negative | 3693821 - 3694246 | 15781.0 |
| Phage holin | BK334_18105 | Not Available | Negative | 3694234 - 3694659 | 15518.5 |
| Endolysin | BK334_18110 | Not Available | Negative | 3694674 - 3695171 | 18539.1 |
| Holin | BK334_18115 | Not Available | Negative | 3695158 - 3695451 | 10189.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





