Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys; | Not Available | Not Available | Positive | 205362 - 205437 | Not Available |
| Trna-lys; | Not Available | Not Available | Positive | 205471 - 205546 | Not Available |
| Putative selenium-binding protein ydfz | BK334_01115 | Not Available | Negative | 206530 - 206733 | 7276.83 |
| gntr family transcriptional regulator | BK334_01120 | Not Available | Negative | 206910 - 207596 | 26594.7 |
| Hypothetical protein | BK334_01125 | Not Available | Negative | 207685 - 208431 | 27250.5 |
| Hypothetical protein | BK334_04480 | Not Available | Negative | 926634 - 926786 | 5689.89 |
| Hypothetical protein | BK334_04485 | Not Available | Positive | 926804 - 926995 | 7462.05 |
| Putative outer membrane lipoprotein | BK334_04490 | Not Available | Positive | 927309 - 927824 | 17574.9 |
| Hypothetical protein | BK334_04495 | Not Available | Positive | 927840 - 928380 | 20089.6 |
| Attl | Not Available | Not Available | Positive | 928473 - 928489 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





