Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail length tape measure protein | BK334_01040 | Not Available | Positive | 187804 - 190869 | 112154.0 |
| Putative minor tail protein | BK334_01045 | Not Available | Positive | 190869 - 191198 | 12530.1 |
| Putative minor tail protein | BK334_01050 | Not Available | Positive | 191208 - 191906 | 25664.9 |
| Tail fiber component | BK334_01055 | Not Available | Positive | 191912 - 192655 | 28388.4 |
| Putative tail component | BK334_01060 | Not Available | Positive | 192592 - 193200 | 21266.6 |
| Putative tail tip assembly protein | BK334_01065 | Not Available | Positive | 193261 - 196740 | 127461.0 |
| Lom protein | BK334_01070 | Not Available | Positive | 196808 - 197407 | 21853.3 |
| Tail fiber protein | BK334_01075 | Not Available | Positive | 197472 - 199844 | 83117.9 |
| Hypothetical protein | BK334_01080 | Not Available | Positive | 199841 - 200119 | 10858.7 |
| Tail fiber protein | BK334_01085 | Not Available | Positive | 200130 - 201170 | 37908.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





