Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 559 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1380299 bp
Thymine Count
1370426 bp
Guanine Count
1397663 bp
Cytosine Count
1406134 bp
Genome Length
5555351 bp
Protein-coding Genes
4953 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Outer membrane protein lom precursor | BK334_00870 | Not Available | Positive | 166031 - 166630 | 21767.1 |
| Putative tail protein | BK334_00875 | Not Available | Positive | 166809 - 167342 | 18187.4 |
| Bacteriophage clp protease involved in capsid processing | BK334_01000 | Not Available | Positive | 183240 - 184616 | 49784.0 |
| Hypothetical protein | BK334_01005 | Not Available | Positive | 184702 - 185025 | 11071.3 |
| Hypothetical protein | BK334_01010 | Not Available | Positive | 185018 - 185293 | 10117.2 |
| Putative tail component | BK334_01015 | Not Available | Positive | 185305 - 185895 | 22029.1 |
| Putative tail component | BK334_01020 | Not Available | Positive | 185892 - 186293 | 15073.8 |
| Putative major tail subunit | BK334_01025 | Not Available | Positive | 186304 - 187047 | 25711.2 |
| Minor tail protein | BK334_01030 | Not Available | Positive | 187108 - 187494 | 14300.8 |
| Putative minor tail protein | BK334_01035 | Not Available | Positive | 187515 - 187820 | 11425.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





