Pseudomonas fluorescens strain 48D1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain 48D1 is a Gram-negative, rod-shaped bacterium that thrives as a heterotroph in various habitats. This organism is aerobe, requiring oxygen for growth, and exhibits mobility due to the presence of flagella. It is classified as mesophilic, with an optimal growth temperature of 25°C, and has a single replicon and a double membrane structure. Strain 48D1 is free-living and engages in biotic relationships with a diverse range of hosts, including Homo sapiens, various Metazoa, and multiple plant species such as Triticum aestivum (wheat), Solanum tuberosum (potato), and Solanum lycopersicum (tomato). It is also associated with several amphibian species and various plants, indicating its ecological versatility. Despite its beneficial roles in the environment, Pseudomonas fluorescens strain 48D1 is known to be associated with bacterial infections in animals, suggesting a pathogenicity potential. This characteristic emphasizes the importance of understanding the ecological roles and health implications of Pseudomonas fluorescens strains, particularly in contexts where they interact with both plant and animal hosts. The strain's diverse host range and free-living nature highlight its ecological significance, as it may play a role in nutrient cycling and microbial interactions within various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain 48D1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain 48D1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain 48D1 48D1_Joined_contig_3, whole

Gene Summary

Adenine Count

1243222 bp

Thymine Count

1265377 bp

Guanine Count

1910954 bp

Cytosine Count

1874182 bp

Genome Length

6294190 bp

Protein-coding Genes

5318 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative baseplate assembly proteinBK669_09925Not AvailablePositive2228328 - 222866012157.5
Baseplate assembly proteinBK669_09930Not AvailablePositive2228657 - 222965236315.2
Phage tail protein iBK669_09935Not AvailablePositive2229649 - 223028422965.1
Tail proteinBK669_09940Not AvailablePositive2230285 - 223301795083.3
Putative tail-fiber proteinBK669_09945Not AvailablePositive2233206 - 223355912809.3
Hypothetical proteinBK669_09950Not AvailablePositive2233661 - 22338466437.63
Major tail sheath proteinBK669_09955Not AvailablePositive2233849 - 223501541807.9
Putative tail tube proteinBK669_09960Not AvailablePositive2235015 - 223552118335.3
Hypothetical proteinBK669_09965Not AvailablePositive2235673 - 223625421690.9
Putative tail tape measureBK669_09970Not AvailablePositive2236383 - 223884882726.5

Displaying genes 61 – 70 of 5495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial infectionsCausesPMC7578172

Displaying health effects 1 – 1 of 1 in total