Pseudomonas fluorescens strain 48D1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain 48D1 is a Gram-negative, rod-shaped bacterium that thrives as a heterotroph in various habitats. This organism is aerobe, requiring oxygen for growth, and exhibits mobility due to the presence of flagella. It is classified as mesophilic, with an optimal growth temperature of 25°C, and has a single replicon and a double membrane structure. Strain 48D1 is free-living and engages in biotic relationships with a diverse range of hosts, including Homo sapiens, various Metazoa, and multiple plant species such as Triticum aestivum (wheat), Solanum tuberosum (potato), and Solanum lycopersicum (tomato). It is also associated with several amphibian species and various plants, indicating its ecological versatility. Despite its beneficial roles in the environment, Pseudomonas fluorescens strain 48D1 is known to be associated with bacterial infections in animals, suggesting a pathogenicity potential. This characteristic emphasizes the importance of understanding the ecological roles and health implications of Pseudomonas fluorescens strains, particularly in contexts where they interact with both plant and animal hosts. The strain's diverse host range and free-living nature highlight its ecological significance, as it may play a role in nutrient cycling and microbial interactions within various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain 48D1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain 48D1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain 48D1 48D1_Joined_contig_3, whole

Gene Summary

Adenine Count

1243222 bp

Thymine Count

1265377 bp

Guanine Count

1910954 bp

Cytosine Count

1874182 bp

Genome Length

6294190 bp

Protein-coding Genes

5318 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
demethoxyubiquinone hydroxylase family proteinBK669_21410Not AvailablePositive4820401 - 482104823954.7
s-adenosylmethionine decarboxylaseBK669_21415Not AvailableNegative4821167 - 482196130197.5
peroxiredoxinBK669_21420Not AvailableNegative4822200 - 482262215057.4
transcriptional regulator crpBK669_21425Not AvailablePositive4822860 - 482350424182.4
lipoate--protein ligaseBK669_21430Not AvailableNegative4823515 - 482421325276.3
indole-3-glycerol-phosphate synthaseBK669_21435Not AvailableNegative4824348 - 482518730163.4
anthranilate phosphoribosyltransferaseBK669_21440Not AvailableNegative4825184 - 482623337146.9
anthranilate/aminodeoxychorismate synthase component iiBK669_21445Not AvailableNegative4826243 - 482683621724.1
autotransporter outer membrane beta-barrel domain-containing proteinBK669_21450Not AvailablePositive4827244 - 482915468867.5
anthranilate synthase component iBK669_21455Not AvailableNegative4829326 - 483080754381.2

Displaying genes 4251 – 4260 of 5495 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial infectionsCausesPMC7578172

Displaying health effects 1 – 1 of 1 in total