Pseudomonas fluorescens strain 48D1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain 48D1 is a Gram-negative, rod-shaped bacterium that thrives as a heterotroph in various habitats. This organism is aerobe, requiring oxygen for growth, and exhibits mobility due to the presence of flagella. It is classified as mesophilic, with an optimal growth temperature of 25°C, and has a single replicon and a double membrane structure. Strain 48D1 is free-living and engages in biotic relationships with a diverse range of hosts, including Homo sapiens, various Metazoa, and multiple plant species such as Triticum aestivum (wheat), Solanum tuberosum (potato), and Solanum lycopersicum (tomato). It is also associated with several amphibian species and various plants, indicating its ecological versatility. Despite its beneficial roles in the environment, Pseudomonas fluorescens strain 48D1 is known to be associated with bacterial infections in animals, suggesting a pathogenicity potential. This characteristic emphasizes the importance of understanding the ecological roles and health implications of Pseudomonas fluorescens strains, particularly in contexts where they interact with both plant and animal hosts. The strain's diverse host range and free-living nature highlight its ecological significance, as it may play a role in nutrient cycling and microbial interactions within various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain 48D1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain 48D1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain 48D1 48D1_Joined_contig_3, whole

Gene Summary

Adenine Count

1243222 bp

Thymine Count

1265377 bp

Guanine Count

1910954 bp

Cytosine Count

1874182 bp

Genome Length

6294190 bp

Protein-coding Genes

5318 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rip metalloprotease rsepBK669_09755Not AvailablePositive2190738 - 219209048437.3
outer membrane protein assembly factor bamaBK669_09760Not AvailablePositive2192165 - 219454087176.3
hypothetical proteinBK669_09765Not AvailablePositive2194586 - 219508918908.2
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseBK669_09770Not AvailablePositive2195093 - 219614836324.7
3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabzBK669_09775Not AvailablePositive2196255 - 219669516659.5
acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferaseBK669_09780Not AvailablePositive2196692 - 219746827998.4
lipid-a-disaccharide synthaseBK669_09785Not AvailablePositive2197471 - 219860140945.6
ribonuclease hiiBK669_09790Not AvailablePositive2198613 - 219923922513.6
dna polymerase iii subunit alphaBK669_09795Not AvailablePositive2199316 - 2202837131208.0
acetyl-coa carboxylase carboxyltransferase subunit alphaBK669_09800Not AvailablePositive2202977 - 220392435059.2

Displaying genes 2021 – 2030 of 5495 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial infectionsCausesPMC7578172

Displaying health effects 1 – 1 of 1 in total