Pseudomonas frederiksbergensis strain 94G2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas frederiksbergensis strain 94G2 is characterized by having a single replicon, which is a notable trait for its genomic structure. The strain is cataloged under the accession number MOBL00000000.1, providing a reference point for researchers interested in studying its genetic makeup. The singular replicon indicates a streamlined genomic organization, which may influence the strain's adaptability and metabolic capabilities. This trait can potentially impact how the organism interacts with its environment, as it may allow for more efficient replication and gene expression. In ecological contexts, Pseudomonas species are well-known for their versatile metabolism and ability to thrive in diverse environments, often contributing to nutrient cycling and bioremediation. The unique traits of Pseudomonas frederiksbergensis strain 94G2 could suggest its potential role in specific ecological niches, where it may engage in beneficial interactions with other microorganisms or contribute to the degradation of environmental contaminants. Overall, the combination of having a single replicon and the established identity of the strain provides a foundation for further exploration into its functions and ecological significance. Understanding such traits can enhance our knowledge of microbial diversity and the roles these organisms play in their respective ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas frederiksbergensis
Strainstrain 94G2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas frederiksbergensis strain 94G2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas frederiksbergensis strain 94G2 94G2_contig_865, whole

Gene Summary

Adenine Count

1316947 bp

Thymine Count

1321274 bp

Guanine Count

1909464 bp

Cytosine Count

1903950 bp

Genome Length

6454846 bp

Protein-coding Genes

5383 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr family transcriptional regulatorBK661_19420Not AvailableNegative4361557 - 436218923893.7
efflux transporter periplasmic adaptor subunitBK661_19425Not AvailablePositive4362454 - 436361140907.6
multidrug efflux rnd transporter permeaseBK661_19430Not AvailablePositive4363615 - 4366779113139.0
multidrug transporterBK661_19435Not AvailablePositive4366779 - 436823952754.0
porinBK661_19440Not AvailablePositive4368678 - 436993746127.8
4-carboxymuconolactone decarboxylaseBK661_19445Not AvailableNegative4370049 - 437044114744.6
3-oxoadipate enol-lactonaseBK661_19450Not AvailableNegative4370452 - 437124328397.7
3-carboxy-cis,cis-muconate cycloisomeraseBK661_19455Not AvailableNegative4371255 - 437261948972.1
protocatechuate 3,4-dioxygenase subunit alphaBK661_19460Not AvailableNegative4372864 - 437343020775.5
protocatechuate 3,4-dioxygenase subunit betaBK661_19465Not AvailableNegative4373432 - 437413626342.1

Displaying genes 3861 – 3870 of 5474 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.