Pseudomonas chlororaphis strain 14D6

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis strain 14D6 is a Gram-negative, rod-shaped bacterium primarily found in the root nodules and rhizosphere of Chamaecytisus albus. This strain is notable for its single replicon structure, which is characteristic of many Pseudomonas species. The ecological role of Pseudomonas chlororaphis strain 14D6 extends to its interactions with various hosts, including members of the Viridiplantae kingdom, particularly Brassica napus var. napus. While this bacterium is associated with plant environments, it also exhibits pathogenicity towards animals, indicating a versatile interaction with different biological systems. The habitat preference for root nodules suggests that this strain may play a role in plant health, potentially influencing nutrient cycling and plant growth. The presence of Pseudomonas chlororaphis in these specialized environments may indicate its importance in symbiotic relationships with plants, which could enhance their resilience against pathogens and environmental stressors. In conclusion, Pseudomonas chlororaphis strain 14D6 exemplifies the complexity of microbial interactions in terrestrial ecosystems, highlighting its dual role as both a plant-associated beneficial organism and a potential pathogen in animal systems. This duality underscores the significance of understanding microbial ecology in agricultural and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainstrain 14D6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis strain 14D6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnodules of Chamaecytisus albus; rhizosphere; root nodules
Biotic relationshipNot Available
Host(s)Viridiplantae, Brassica napus var. napus, Persea americana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Pseudomonas chlororaphis strain 14D6 14D6_contig_18, whole genome

Gene Summary

Adenine Count

1318958 bp

Thymine Count

1318338 bp

Guanine Count

2191548 bp

Cytosine Count

2183398 bp

Genome Length

7012595 bp

Protein-coding Genes

6136 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent fis family transcriptional regulatorBK634_22485Not AvailablePositive4991152 - 499307770377.4
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseBK634_22490Not AvailablePositive4993217 - 499456648211.0
aromatic acid decarboxylaseBK634_22495Not AvailablePositive4994563 - 499519522841.6
hypothetical proteinBK634_22500Not AvailablePositive4995188 - 49954759607.91
nucleoside-diphosphate sugar epimeraseBK634_22505Not AvailableNegative4995557 - 499619823344.6
peptidase c13BK634_22510Not AvailableNegative4996228 - 499794662139.4
dehydrataseBK634_22515Not AvailableNegative4998048 - 499850316956.8
cida/lrga family proteinBK634_22520Not AvailablePositive4998684 - 499904613033.8
hypothetical proteinBK634_22525Not AvailablePositive4999043 - 499975924897.5
atp-dependent proteaseBK634_22530Not AvailablePositive4999770 - 500036021670.3

Displaying genes 4511 – 4520 of 6235 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.