Pseudomonas chlororaphis strain 14D6

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis strain 14D6 is a Gram-negative, rod-shaped bacterium primarily found in the root nodules and rhizosphere of Chamaecytisus albus. This strain is notable for its single replicon structure, which is characteristic of many Pseudomonas species. The ecological role of Pseudomonas chlororaphis strain 14D6 extends to its interactions with various hosts, including members of the Viridiplantae kingdom, particularly Brassica napus var. napus. While this bacterium is associated with plant environments, it also exhibits pathogenicity towards animals, indicating a versatile interaction with different biological systems. The habitat preference for root nodules suggests that this strain may play a role in plant health, potentially influencing nutrient cycling and plant growth. The presence of Pseudomonas chlororaphis in these specialized environments may indicate its importance in symbiotic relationships with plants, which could enhance their resilience against pathogens and environmental stressors. In conclusion, Pseudomonas chlororaphis strain 14D6 exemplifies the complexity of microbial interactions in terrestrial ecosystems, highlighting its dual role as both a plant-associated beneficial organism and a potential pathogen in animal systems. This duality underscores the significance of understanding microbial ecology in agricultural and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainstrain 14D6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis strain 14D6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnodules of Chamaecytisus albus; rhizosphere; root nodules
Biotic relationshipNot Available
Host(s)Viridiplantae, Brassica napus var. napus, Persea americana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Pseudomonas chlororaphis strain 14D6 14D6_contig_18, whole genome

Gene Summary

Adenine Count

1318958 bp

Thymine Count

1318338 bp

Guanine Count

2191548 bp

Cytosine Count

2183398 bp

Genome Length

7012595 bp

Protein-coding Genes

6136 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrogen cyanide synthaseBK634_16115Not AvailablePositive3518953 - 352021545418.6
hypothetical proteinBK634_16120Not AvailablePositive3520316 - 352064811825.3
rpir family transcriptional regulatorBK634_16125Not AvailableNegative3520659 - 352157934393.0
5-dehydro-2-deoxygluconokinaseBK634_16130Not AvailablePositive3521891 - 352383171381.7
myo-inosose-2 dehydrataseBK634_16135Not AvailablePositive3523952 - 352486033257.5
5-deoxy-glucuronate isomeraseBK634_16140Not AvailablePositive3524857 - 352566329472.7
methylmalonate-semialdehyde dehydrogenase (acylating)BK634_16145Not AvailablePositive3525746 - 352724553541.4
xylose isomeraseBK634_16150Not AvailablePositive3527282 - 352810329960.8
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)BK634_16155Not AvailablePositive3528236 - 353017370206.9
inositol 2-dehydrogenaseBK634_16160Not AvailablePositive3530208 - 353121836329.7

Displaying genes 3251 – 3260 of 6235 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.