Pseudomonas cedrina subsp. cedrina strain DSM 17516

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas cedrina subsp. cedrina strain DSM 17516 is characterized by having a single replicon, which is a notable trait for its genetic organization. This unique feature can influence its adaptability and replication processes in various environments. The strain is cataloged under the accession number MNPW00000000.1, providing a reference point for genetic and biochemical studies. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse ecological niches. Although specific metabolic pathways for strain DSM 17516 are not detailed in the provided data, the genus Pseudomonas is generally associated with the capacity to degrade a variety of organic compounds, which may suggest potential applications in bioremediation and environmental management. The ecological role of Pseudomonas cedrina subsp. cedrina in its native habitat may include interactions with other microorganisms and plants, contributing to nutrient cycling and soil health. Given its single replicon structure, this strain may exhibit efficient regulatory mechanisms for gene expression, which could enhance its survival and adaptability in fluctuating environments. In summary, Pseudomonas cedrina subsp. cedrina strain DSM 17516 exemplifies a microbial entity with a single replicon that may play a significant role in ecological processes, particularly in nutrient cycling and organic matter degradation, although further studies would be necessary to elucidate its specific metabolic capabilities and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas cedrina
Strainsubsp. cedrina strain DSM 17516

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas cedrina subsp. cedrina strain DSM 17516
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas cedrina subsp. cedrina strain DSM 17516

Gene Summary

Adenine Count

1274933 bp

Thymine Count

1284122 bp

Guanine Count

1984256 bp

Cytosine Count

1970256 bp

Genome Length

6513568 bp

Protein-coding Genes

5608 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome o ubiquinol oxidase subunit iiiBLL36_02670Not AvailableNegative577241 - 57786723070.2
cytochrome o ubiquinol oxidase subunit iBLL36_02675Not AvailableNegative577871 - 57988974791.3
ubiquinol oxidase subunit iiBLL36_02680Not AvailableNegative579893 - 58083434661.3
disulfide bond formation protein bBLL36_02685Not AvailableNegative581629 - 58213518118.8
nitric oxide dioxygenaseBLL36_02690Not AvailableNegative582351 - 58353242666.2
nitric oxide reductase transcription regulatorBLL36_02695Not AvailablePositive583680 - 58522456874.3
eama family transporterBLL36_02700Not AvailableNegative585336 - 58623832479.1
arac family transcriptional regulatorBLL36_02705Not AvailablePositive586375 - 58725032356.7
helix-turn-helix transcriptional regulatorBLL36_02710Not AvailableNegative587247 - 58974892765.7
outer membrane lipoprotein-sorting proteinBLL36_02715Not AvailableNegative589957 - 59131550550.0

Displaying genes 681 – 690 of 5780 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.