Pseudomonas cedrina subsp. cedrina strain DSM 17516

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas cedrina subsp. cedrina strain DSM 17516 is characterized by having a single replicon, which is a notable trait for its genetic organization. This unique feature can influence its adaptability and replication processes in various environments. The strain is cataloged under the accession number MNPW00000000.1, providing a reference point for genetic and biochemical studies. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse ecological niches. Although specific metabolic pathways for strain DSM 17516 are not detailed in the provided data, the genus Pseudomonas is generally associated with the capacity to degrade a variety of organic compounds, which may suggest potential applications in bioremediation and environmental management. The ecological role of Pseudomonas cedrina subsp. cedrina in its native habitat may include interactions with other microorganisms and plants, contributing to nutrient cycling and soil health. Given its single replicon structure, this strain may exhibit efficient regulatory mechanisms for gene expression, which could enhance its survival and adaptability in fluctuating environments. In summary, Pseudomonas cedrina subsp. cedrina strain DSM 17516 exemplifies a microbial entity with a single replicon that may play a significant role in ecological processes, particularly in nutrient cycling and organic matter degradation, although further studies would be necessary to elucidate its specific metabolic capabilities and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas cedrina
Strainsubsp. cedrina strain DSM 17516

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas cedrina subsp. cedrina strain DSM 17516
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas cedrina subsp. cedrina strain DSM 17516

Gene Summary

Adenine Count

1274933 bp

Thymine Count

1284122 bp

Guanine Count

1984256 bp

Cytosine Count

1970256 bp

Genome Length

6513568 bp

Protein-coding Genes

5608 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional diguanylate cyclase/phosphodiesteraseBLL36_20900Not AvailableNegative4650709 - 4654452139991.0
rna polymerase sigma factor rpodBLL36_20905Not AvailableNegative4654573 - 465642369377.0
dna primaseBLL36_20910Not AvailableNegative4656491 - 465846172954.7
hypothetical proteinBLL36_20915Not AvailablePositive4658824 - 465921614107.0
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadBLL36_20920Not AvailablePositive4659326 - 466035136407.2
glycerol-3-phosphate acyltransferaseBLL36_20925Not AvailableNegative4660385 - 466095420346.7
dihydroneopterin aldolaseBLL36_20930Not AvailablePositive4661029 - 466138213098.7
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseBLL36_20935Not AvailablePositive4661373 - 466189119051.0
multifunctional cca trna nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphataseBLL36_20940Not AvailableNegative4661886 - 466311545775.2
spovr family proteinBLL36_20945Not AvailableNegative4663179 - 466474161084.3

Displaying genes 4241 – 4250 of 5780 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.